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SCVI tools with large datasets
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2
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208
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February 9, 2024
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Computing neighbors from X_scANVI representation
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0
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101
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February 4, 2024
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How to save intermediate checkpoints?
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3
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289
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February 3, 2024
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Using a model with categorical_covariate_key instead of batch_key
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2
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174
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February 1, 2024
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GIMVI, label specification for single cell and spatial data
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0
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97
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January 28, 2024
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Preparing data for training of a classifier while preserving biological signal
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0
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91
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January 27, 2024
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Label Transfer Discrepancy in scANVI Model Training
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2
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134
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January 22, 2024
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Differential expression and rarely expressed genes
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1
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128
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January 20, 2024
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Encountering Error in Label Transfer : Query Dataset Slightly Larger than Reference Dataset
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3
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96
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January 11, 2024
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scVI dropout, need for it?
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2
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136
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January 10, 2024
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Attribute Error while training simplescvi on tutorial lung data. Differences to full scvi?
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2
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106
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January 9, 2024
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Adding cycle consistency loss and VampPrior to scVI
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2
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88
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January 9, 2024
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Denoising/remove ambient RNA with scAR then scvi modeling?
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3
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156
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January 6, 2024
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Interpretation and visualization of MrVI output?
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1
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127
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January 6, 2024
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Clustering on the scVI latent space generates only gray-colored cells
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4
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142
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December 24, 2023
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Kernel dies when training simple SCVI on mac m3
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1
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143
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December 20, 2023
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How to use normalised expression
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0
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159
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December 19, 2023
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MultiVI error on only paired data
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3
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281
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December 19, 2023
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Predicting of unassigned cells using scANVI
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0
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124
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December 10, 2023
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Error running ModelTuner.fit
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5
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338
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December 8, 2023
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scVI integration with all genes
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0
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184
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December 5, 2023
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Suggestion on parameters for training scvi model
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3
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419
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December 4, 2023
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scPoli implementation in dcvi-tools
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2
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94
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December 1, 2023
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When mutli-gpu support is planned on scanvi?
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3
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156
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December 1, 2023
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Nested batch effects with scvi
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3
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155
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November 29, 2023
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Scvi for developmental data
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4
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135
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November 29, 2023
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Compatibility between scVI and SCENIC
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10
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382
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November 28, 2023
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MultiVI size factor for multiple modalities
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0
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117
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November 24, 2023
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MrVI input and interpretation
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12
|
740
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November 21, 2023
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Setting num_workers in DataLoader for improving train performance
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2
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422
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November 21, 2023
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