As per the guide
vae = scvi.model.SCVI(adata)
solo_batch_1 = scvi.external.SOLO.from_scvi_model(vae, restrict_to_batch=“batch 1”)
but what if you want to use a batch term in the model that is not the microfluidics channel (i.e processing batch, etc… because individual channels might be technical replicates of each other) ,
but then want to restrict the SOLO analysis to individual channels?