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Nested batch effects with scvi
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3
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165
|
November 29, 2023
|
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Scvi for developmental data
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4
|
146
|
November 29, 2023
|
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Compatibility between scVI and SCENIC
|
|
10
|
400
|
November 28, 2023
|
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MultiVI size factor for multiple modalities
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0
|
126
|
November 24, 2023
|
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MrVI input and interpretation
|
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12
|
770
|
November 21, 2023
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Setting num_workers in DataLoader for improving train performance
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2
|
528
|
November 21, 2023
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Error in Fine-tuning scANVI Hyperparameters from Pretrained scVI Model
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2
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216
|
November 20, 2023
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Vae_q.latent_space_classifer_ not found in totalVI CITE-seq reference mapping tutorial
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3
|
140
|
November 20, 2023
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Input to scvi encoder
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4
|
415
|
November 14, 2023
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Multi-omics scANVI
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1
|
122
|
November 14, 2023
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Raw count input for scVI cell clustering
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2
|
197
|
November 8, 2023
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mrVI hyperparameter tunning
|
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2
|
183
|
October 25, 2023
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Increase scVI integration speed
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|
5
|
469
|
October 24, 2023
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scVI integration using two batch keys
|
|
5
|
489
|
October 24, 2023
|
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RuntimeWarning: The lr scheduler dict contains the key(s)
|
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0
|
169
|
October 23, 2023
|
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Is it possible to get the saved model from h5ad file?
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3
|
257
|
October 17, 2023
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Mrvi error because of LossRecorder to LossOutput change
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1
|
187
|
October 12, 2023
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Model doesn't contain validation metrics
|
|
7
|
271
|
October 12, 2023
|
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Enviroment.yml file? scvi installation problems
|
|
8
|
611
|
October 11, 2023
|
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Error message cannot import name 'set_verbosity' from 'scvi._settings' when importing scvi
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|
6
|
688
|
October 9, 2023
|
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Query about transfer learning / scArches in SCVI
|
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0
|
163
|
October 7, 2023
|
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Re-integration after subseting cluster
|
|
2
|
308
|
September 26, 2023
|
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Sequential scArches
|
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0
|
190
|
September 24, 2023
|
|
How to install solo-sc or use hashsolo from scvi?
|
|
4
|
460
|
September 11, 2023
|
|
Get var_names used for training SCVI model
|
|
0
|
204
|
September 11, 2023
|
|
scVI reproducibility seed issue
|
|
2
|
463
|
September 7, 2023
|
|
Problems importing scvi [Windows]
|
|
22
|
4493
|
August 29, 2023
|
|
TypeError when trying to set up scvi.model.TOTALVI()
|
|
2
|
262
|
August 29, 2023
|
|
Loading an scVI model from a pytorch lightning checkpoint
|
|
3
|
520
|
August 29, 2023
|
|
Increase number of CPU cores for vae.train() in scvi?
|
|
3
|
475
|
August 28, 2023
|